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at master
123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122{ lib, stdenv, buildPythonPackage, fetchFromGitHub,
# build-system poetry-core, poetry-dynamic-versioning,
# dependencies anytree, beartype, future, gensim, graspologic-native, hyppo, joblib, matplotlib, networkx, numpy, pot, scikit-learn, scipy, seaborn, statsmodels, typing-extensions, umap-learn,
# tests pytestCheckHook, testfixtures,}:
buildPythonPackage rec { pname = "graspologic"; version = "3.4.4"; pyproject = true;
src = fetchFromGitHub { owner = "graspologic-org"; repo = "graspologic"; tag = "v${version}"; hash = "sha256-ulsb7jD/tIVEISjnNRif7VO+ZcXCAGIFl1SNZhOC7ik="; };
# Fix numpy 2 compat postPatch = '' substituteInPlace graspologic/utils/utils.py \ --replace-fail "np.float_" "np.float64" substituteInPlace graspologic/embed/omni.py \ --replace-fail \ "A = np.array(graphs, copy=False, ndmin=3)" \ "A = np.asarray(graphs)" '';
build-system = [ poetry-core poetry-dynamic-versioning ];
pythonRelaxDeps = [ "beartype" "hyppo" "numpy" "scipy" ];
dependencies = [ anytree beartype future gensim graspologic-native hyppo joblib matplotlib networkx numpy pot scikit-learn scipy seaborn statsmodels typing-extensions umap-learn ];
env.NUMBA_CACHE_DIR = "$TMPDIR";
nativeCheckInputs = [ pytestCheckHook testfixtures ];
enabledTestPaths = [ "tests" ];
disabledTests = [ "gridplot_outputs" ];
disabledTestPaths = [ "docs" ] ++ lib.optionals stdenv.hostPlatform.isDarwin [ # SIGABRT "tests/test_plot.py" "tests/test_plot_matrix.py"
# Hang forever "tests/pipeline/embed/" ];
meta = { description = "Package for graph statistical algorithms"; homepage = "https://graspologic-org.github.io/graspologic"; changelog = "https://github.com/graspologic-org/graspologic/releases/tag/${src.tag}"; license = lib.licenses.mit; maintainers = with lib.maintainers; [ bcdarwin ]; };}