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123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051{ lib, stdenv, fetchFromGitHub, cmake, libcxx, zlib, nix-update-script,}:stdenv.mkDerivation (finalAttrs: { pname = "splitcode"; version = "0.31.6";
src = fetchFromGitHub { owner = "pachterlab"; repo = "splitcode"; tag = "v${finalAttrs.version}"; hash = "sha256-80XrLr6gk398a/JVSpb8j0i2pMEDKn0EnTiSw7cWS2c="; };
nativeBuildInputs = [ cmake ];
buildInputs = [ libcxx zlib ];
doCheck = true; checkPhase = '' mkdir func_tests cp $src/func_tests/* ./func_tests/ bash ./func_tests/runtests.sh '';
passthru.updateScript = nix-update-script { };
meta = { description = "Tool for flexible, efficient parsing, interpreting, and editing of technical sequences in sequencing reads"; homepage = "https://github.com/pachterlab/splitcode"; license = lib.licenses.bsd2; # also compiles on macos, but since it seems to return invalid results. platforms = lib.platforms.linux; maintainers = with lib.maintainers; [ zimward ]; mainProgram = "splitcode"; badPlatforms = [ # Test hangs indefinitely. See https://github.com/pachterlab/splitcode/issues/31 "aarch64-linux" ]; };})