Something went wrong. Try again.
What happens if I push all of nixpkgs
Something went wrong. Try again.
1.5 kB · 69 lines
Nix
at gcc-offload
12345678910111213141516171819202122232425262728293031323334353637383940414243444546474849505152535455565758596061626364656667686970{ lib, buildPythonPackage, fetchFromGitHub, biopython, docopt, flametree, numpy, proglog, pytestCheckHook, pythonOlder, python-codon-tables, primer3, genome-collector, matplotlib,}:
buildPythonPackage rec { pname = "dnachisel"; version = "3.2.12"; format = "setuptools";
disabled = pythonOlder "3.7";
src = fetchFromGitHub { owner = "Edinburgh-Genome-Foundry"; repo = "DnaChisel"; rev = "refs/tags/v${version}"; hash = "sha256-zoKaeK0b4EoxEQMODfrzDpI7xIKQ/w6Dmot+dw92fuw="; };
propagatedBuildInputs = [ biopython docopt flametree numpy proglog python-codon-tables ];
nativeCheckInputs = [ primer3 genome-collector matplotlib pytestCheckHook ];
# Disable tests which requires network access disabledTests = [ "test_circular_sequence_optimize_with_report" "test_constraints_reports" "test_optimize_with_report" "test_optimize_with_report_no_solution" "test_avoid_blast_matches_with_list" "test_avoid_phage_blast_matches" "test_avoid_matches_with_list" "test_avoid_matches_with_phage" ];
pythonImportsCheck = [ "dnachisel" ];
meta = with lib; { homepage = "https://github.com/Edinburgh-Genome-Foundry/DnaChisel"; description = "Optimize DNA sequences under constraints"; changelog = "https://github.com/Edinburgh-Genome-Foundry/DnaChisel/releases/tag/v${version}"; license = licenses.mit; maintainers = with maintainers; [ prusnak ]; };}