Something went wrong. Try again.
What happens if I push all of nixpkgs
Something went wrong. Try again.
1.7 kB · 86 lines
Nix
123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687{ lib, buildPythonPackage, fetchFromGitHub, pythonOlder,
# build system setuptools, setuptools-scm,
# dependencies numpy, scikit-image, torchvision, torch, runstats, pytorch-lightning, h5py, pyyaml, torchmetrics, pandas,
# tests pytestCheckHook,}:
buildPythonPackage rec { pname = "fastmri"; version = "0.3.0"; pyproject = true;
disabled = pythonOlder "3.8";
src = fetchFromGitHub { owner = "facebookresearch"; repo = "fastMRI"; tag = "v${version}"; hash = "sha256-0IJV8OhY5kPWQwUYPKfmdI67TyYzDAPlwohdc0jWcV4="; };
# banding_removal folder also has a subfolder named "fastmri" # and np.product is substituted with np.prod in new numpy versions postPatch = '' substituteInPlace tests/test_math.py \ --replace-fail "np.product" "np.prod" substituteInPlace tests/conftest.py \ --replace-fail "np.product" "np.prod"
rm -rf banding_removal '';
build-system = [ setuptools setuptools-scm ];
dependencies = [ numpy scikit-image torchvision torch runstats pytorch-lightning h5py pyyaml torchmetrics pandas ];
nativeCheckInputs = [ pytestCheckHook ];
disabledTestPaths = [ # much older version of pytorch-lightning is used "tests/test_modules.py" ];
pythonImportsCheck = [ "fastmri" ];
meta = { description = "Pytorch-based MRI reconstruction tooling"; homepage = "https://github.com/facebookresearch/fastMRI"; changelog = "https://github.com/facebookresearch/fastMRI/releases/tag/v${version}"; license = lib.licenses.mit; maintainers = with lib.maintainers; [ osbm ]; };}